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Genetically encoded X-ray cellular imaging for nanoscale protein localization
Authors:Huating Kong  Jichao Zhang  Jiang Li  Jian Wang  Hyun-Joon Shin  Renzhong Tai  Qinglong Yan  Kai Xia  Jun Hu  Lihua Wang  Ying Zhu  Chunhai Fan
Abstract:Spatial resolution defines the physical limit of microscopes for probing biomolecular localization and interactions in cells. Whereas synchrotron-based X-ray microscopy (XRM) represents a unique approach for imaging a whole cell with nanoscale resolution due to its intrinsic nanoscale resolution and great penetration ability, existing approaches to label biomolecules rely on the use of exogenous tags that are multi-step and error-prone. Here, we repurpose engineered peroxidases as genetically encoded X-ray-sensitive tags (GXET) for site-specific labeling of protein-of-interest in mammalian cells. We find that 3,3-diaminobenzidine (DAB) polymers that are in-situ catalytically formed by fusion-expressed peroxidases are visible under XRM. Using this new tag, we imaged the protein location associated with the alteration of a DNA-methylation pathway with an ultra-high resolution of 30 nanometers. Importantly, the excellent energy resolution of XRM enables multicolor imaging using different peroxidase tags. The development of GXET enlightens the way to nanoscopic imaging for biological studies.
Keywords:synchrotron-based X-ray microscopy  cellular imaging  nanoscale protein localization  genetically encoded X-ray tags  3  3  -diaminobenzidine polymers
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