共查询到20条相似文献，搜索用时 218 毫秒
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为研究家蚕质型多角体病毒(BmCPV1)的遗传与变异、探讨S8片段的功能,通过RT-PCR克隆BmCPV1苏州株(BmCPV1-SZ)S8的cDNA,并对其核苷酸序列(GenBank登录号:GQ150539)和编码的氨基酸序列进行生物信息学分析.结果显示:S8由1328 bp构成,具有一个编码390个氨基酸残基的开放阅读框;在BmCPV1-SZ S8的编码氨基酸序列与BmCPV1-I和BmCPV1-H的一致性达93%,但与其他非CPV1型的相似程度较低;在推导的蛋白的氨基酸序列中间区域;具有E-丰富和P-丰富的区,域,其局部区域的氨基酸序列与某些蛋白的功能(细胞周期控制、蛋白降解和RNA降解)区域的序列具有一定的相似性;结构域家族分析显示,BmCPV1-SZ S8编码蛋白属GcrA家族,具有与DNA结合的HTH结构域.Blocks分析显示,S8编码蛋白同时具有DNA聚合酶家族、RNA聚合酶2的结构功能域;高级结构分类显示,S8编码蛋白具有与TIM桶酶、肽酶、核苷三磷酸水解酶相似的同源结构.推测该蛋白具有转录调控因子和多功能酶的功能.基于S8编码的氨基酸序列的进化分析显示,相同类型的CPV聚为一类,同一宿主不同类型的CPV相距较远,推测CPV主要根据其类型聚类,而宿主昆虫对聚类的影响相对较小. 相似文献
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从斜纹夜蛾核多角体病毒（Spodoptera litura multicapsid nucleopolyhedrovirus,SpltMNPV）日本株（C3）基因组中克隆了ie0基因。核苷酸序列分析表明,该克隆片断涵盖了864 bp的读码框及5′端启动子区475 bp和3′端终止区90 bp的序列。氨基酸序列分析显示,在SpltMNPV IE0蛋白N-端23～47位以及111～126位富含酸性氨基酸和疏水性氨基酸残基,C′端第225～271位具有典型的CX2CX14CCX4CX2CX15CX2C双锌指基序,该结构在所比较的9个昆虫杆状病毒IE0蛋白中是十分保守的。联配分析表明,SpltMNPV日本株（C3）的核苷酸序列和氨基酸序列与其他9种核多角体病毒的同源性有较大差异。以ie0基因为基础绘制的杆状病毒分子进化树将家蚕核多角体病毒（Bombyx mori Nu-cleopolyhedrovirus,BmNPV）与苜蓿银纹夜蛾核多角体病毒（Autographa californica multicapcid nucle-opolyhedrovirus,AcMNPV）归到同一分枝,这与以p10、gp37和egt基因为基础绘制的杆状病毒分子进化树结果一致。并进行了大肠杆菌表达和Western Blotting分析。 相似文献
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《科技通报》2016,(1)
在1株污染半夏组培苗的枝状枝孢真菌(Cladosporium cladosporioides DF15)中检测到5条双链RNA(double-strand RNA,ds RNA)条带。通过M-SPAT(modified single-primer amplification technique)、克隆测序获得5条ds RNA的序列信息,分别为ds RNA1(2434bp)、ds RNA2(2241bp)、ds RNA3(2008bp)、ds RNA4(1261bp)和ds RNA5(942bp)。经Blast比对,ds RNA1编码蛋白的氨基酸序列与侵染荚孢壳科、球腔菌科真菌的双分病毒属(Partitivirus)病毒,以及侵染辣椒等植物的双分病毒科(Partitiviridae)病毒的依赖于RNA的RNA聚合酶(RNA-dependent RNA polymerase,Rd Rp)序列相似度最高。氨基酸序列系统进化树分析表明,ds RNA1与侵染真菌的双分病毒属病毒亲源关系更近。通过核苷酸序列5'非编码区(untranslated regions,UTR)的比对发现,5条ds RNA的5'UTR序列相似度高达50.0%~95.3%,并含有2段保守序列5'-GUAAAUAAACCUU-3'和5'-C(/G)TA(/AG)CAAGT(/C)AT-3'。根据上述分析,推测5条ds RNA序列来自同1种病毒基因组,并且为侵染C.cladosporioides的1种新双分病毒科双分病毒属病毒,命名该病毒为C.cladosporioides virus 1。 相似文献
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对Beesia calthifolia等5种金莲花亚科植物的核糖体DNA中的内转录间隔区(ITS)序列及5．8S
rRNA基因的3′端序列进行了测定。这几种金莲花亚科植物的ITS-1的长度范围为225～232 bp,ITS-2
的长度范围为201～217 bp。B．calthifolia的ITS-1(227 bp)和ITS-2(215 bp)的长度及序列均与升麻
属及类叶升麻属植物相近,其5.8S rRNA基因的3′端序列也近乎与升麻属及类叶升麻属植物完全一致
(仅一个碱基缺失的差异),但其在上述几方面均与金莲花属植物相差甚远。以Ranunculus enysii作为
外类群,运用PAUP软件进行的系统发育分析表明:B．calthifolia,Cimicifuga acerina,C．brachycarpa
和Actaea asiatica形成一个单系群,并得到bootstrap分析的极强支持,B．calthifolia位于这一单系群的
基部。这一DNA序列分析结果与来自植物化学、孢粉学和细胞学的研究结果相吻合,更进一步支持铁破锣属是升麻族的自然成员,并可能是升麻族中一个最原始的类群。 相似文献
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Zn/Cd超富集植物天蓝遏蓝菜(Thlaspi caerulescens)中TcCaM2基因的克隆及在酵母中的重金属耐受性分析 总被引：1，自引：0，他引：1
从重金属超富集植物天蓝遏蓝菜(T. caerulescens)Cd胁迫的cDNA文库中，通过基因表达的差异筛选得到的阳性克隆之一，核苷酸序列分析表明与拟南芥CaM2的相似性高达92%，故命名为TcCaM2(T. caerulescens CaM2, GenBank No. EF053035)。其核苷酸序列与迄今已知的钙调蛋白基因同源率在83%以上，其氨基酸序列同源性高达95%以上，与大多数高等植物的CaM，如印度芥菜、拟南芥、水稻等同源性则更高。将TcCaM2基因置于酵母表达启动子之下，构建酵母表达载体，并将其转入重金属敏感型酵母突变菌株，酵母重金属耐受实验表明，TcCaM2在酵母中的过量表达提高了酵母对Co2+或Ni2+的耐受性，增加了对Cd2+的敏感性，对Zn2+胁迫抗性稍有增加但差异不显著；说明TcCaM2通过其对重金属离子的结合作用及在信号转导系统中的功能，在植物细胞对重金属的富集、耐性中发挥了重要的调节作用。 相似文献
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对分布于我国的木来木属Cornus L．(广义)4个主要类群的5种植物进行了细胞学研究。结果表明，这5种植物的染色体数目和核型分别为：灯台树 C．controversa Hemsl．2n=20=2m+8sm+10st；红瑞木 C．alba L．2n=22=8sm+12st+2t；毛木来C．walteri Wanger．2n=22=8sm+14st(0-2SAT)；山茱萸C.officinalis Seid. et Zucc. 2n=18=8m+l0sm(0-2SAT)；四照花(变种)C．kousa var. chinensis Osborn 2n=22=2sm+6st(0-2SAT)十14t。 相似文献
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利用同步辐射光和反射飞行时间质谱,研究了丙烯酸甲酯9.0~15.5 eV能量范围的真空紫外光电离和光解离.实验测量丙烯酸甲酯的光电离质谱和解离碎片离子m/e=86(C4H6O+2), 85(C4H5O+2), 59(C2H3O+2), 58(C3H6O+), 55(C3H3O+), 42(C3H+6), 31(CH3O+), 27(C2H+3), 和15(CH+3)的光电离效率曲线.并利用量子化学从头算(G3),计算碎片离子的能级,推测它们的解离通道.计算的电离能和出现势与实验结果符合很好.结果表明,丙烯酸甲酯的光电离解离通道以单键断裂反应为主. 相似文献
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利用同源克隆的方法,从商陆中克隆得到扩展蛋白基因的全长cDNA序列,命名为PaEXP1(GenBank 登录号为GQ851947).PaEXP1长1128bp,含有759bp的完整开放阅读框,编码252个氨基酸,分子量27.1kD,等电点8.55.PaEXP1氨基酸序列N端含有8个半胱氨酸残基,1个组氨酸(His-Phe-Asp,HFD)域,C末端存在4个保守的色氨酸残基,具有扩展蛋白的典型结构.系统进化树分析表明,PaEXP1属于扩展蛋白的α-扩展蛋白家族.Real time-PCR结果表明,PaEXP1主要在根中表达,低温、盐、重金属和渗透胁迫均强烈地抑制其基因的表达.酵母转化实验表明,转PaEXP1可以提高酵母的平均直径,说明PaEXP1参与细胞壁的松弛扩展和细胞的增大过程. 相似文献
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从垂序商陆(Phytolacca americana)的重金属镉胁迫下商陆幼苗叶片的正反向抑制性消减杂交文库(SSH文库)中,获得商陆寡肽转运蛋白基因的EST序列.利用RACE的方法克隆到该基因的全序列cDNA(PaOPT,GenBank注册HQ647015).PaOPT基因在进化中的地位分析表明:它可能属于OPT3基因家族.利用实时荧光定量PCR的方法,分析PaOPT的组织表达特异性以及商陆种子成熟及萌发过程的表达模式.结果表明,该基因是一个在种子中特异性表达的基因,预测它对植物的生长发育有着重要的作用. 相似文献
11.
Ajaikumar Sukumaran Rhema Elizabeth Thomas R. Arun Krishnan Thushara Thomas Riji Thomas Deepa K. Vijayan Jofy. K. Paul D. M. Vasudevan 《Indian journal of clinical biochemistry : IJCB》2022,37(3):349
Upon SARS CoV-2 infection, humoral immune system triggers production of anti-SARS CoV-2 IgM and IgG antibodies. Currently, antibodies against SARS CoV-2 spike protein receptor binding domain play a central role in disease protection, making them potential target for in vitro diagnostics applications. This study determines the expression level and sustainability of anti-receptor binding domain (RBD) SARS CoV-2 IgG in post COVID-19 patients. Anti-RBD SARS CoV-2 IgG antibodies in patient serum were analysed by standardised indirect ELISA using SARS CoV-2 spike receptor binding domain protein and HRP conjugated anti-human IgG antibody (anti-h IgG). The study was conducted using 35 adult patient samples with confirmed SARS CoV-2 infection. Additionally, correlation between antibody response after each stage and disease symptoms in post COVID-19 patients were studied. Maximum antibody titre was seen at Day 40 and decreased relatively to Day 180 in antibody positive samples when compared with controls. Overall, more IgG antibody expression is observed in patients who suffered from loss of smell and taste at Day 40. 71% of the positive subjects in this study showed high SARS CoV-2 IgG antibody concentration of above 10 ng/mL and 37% showed strong antibody concentration above 20 ng/mL at the peak of seroconversion. 相似文献
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The nematodes (worms) Caenorhabditiselegans and Caenorhabditisbriggsae are well-known model organisms to study the basis of animal development and behaviour. Their sinusoidal pattern of movement is highly stereotypic and serves as a tool to monitor defects in neurons and muscles that control movement. Until recently, a simple yet robust method to initiate movement response on-demand did not exist. We have found that the electrical stimulation in a microfluidic channel, using constant DC electric field, induces movement (termed electrotaxis) that is instantaneous, precise, sensitive, and fully penetrant. We have further characterized this behaviour and, in this paper, demonstrate that electrotaxis can also be induced using a pulse DC electric signal. Worms responded to pulse DC signals with as low as 30% duty cycle by moving towards the negative electrode at the same speed as constant DC fields (average speed of C. elegans?=?296?±?43?μm/s and C. briggsae?=?356?±?20?μm/s, for both constant and pulse DC electric fields with various frequencies). C. briggsae was found to be more sensitive to electric signals compared to C. elegans. We also investigated the turning response of worms to a change in the direction of constant and pulse DC signals. The response for constant DC signal was found to be instantaneous and similar for most worms. However, in the case of pulse DC signal, alterations in duty cycle affected the turning response time as well as the number of responding worms. Our findings show that pulse DC method allows quantitative measurement of response behaviour of worms and suggest that it could be used as a tool to study the neuronal basis of such a behaviour that is not observed under constant DC conditions. 相似文献
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A new combined time and frequency domain method for the model reduction of discrete systems in z-transfer function is presented. First, the z-transfer functions are transformed into the w-domain by the bilinear transformation, z = (1+w)/(1?w). Then, four model reduction methods—Routh approximation, Hurwitz polynomial approxima- tion, stability equation, and retaining dominant poles—are used respectively to reduce the order of the denominator polynomials in the w-domain. Least squares estimate is then used to find the optimal coefficients in the numerator polynomials of the reduced models so that the unit step response errors are reduced to a minimum. The advantages of the proposed method are that both frequency domain and time domain characteristics of the original systems can be preserved in the reduced models, and the reduced models are always stable provided the original models are stable. 相似文献
16.
Massimo Muratore Vlastimil Srsen Martin Waterfall Andrew Downes Ronald Pethig 《Biomicrofluidics》2012,6(3)
Myoblasts are muscle derived mesenchymal stem cell progenitors that have great potential for use in regenerative medicine, especially for cardiomyogenesis grafts and intracardiac cell transplantation. To utilise such cells for pre-clinical and clinical applications, and especially for personalized medicine, it is essential to generate a synchronised, homogenous, population of cells that display phenotypic and genotypic homogeneity within a population of cells. We demonstrate that the biomarker-free technique of dielectrophoresis (DEP) can be used to discriminate cells between stages of differentiation in the C2C12 myoblast multipotent mouse model. Terminally differentiated myotubes were separated from C2C12 myoblasts to better than 96% purity, a result validated by flow cytometry and Western blotting. To determine the extent to which cell membrane capacitance, rather than cell size, determined the DEP response of a cell, C2C12 myoblasts were co-cultured with GFP-expressing MRC-5 fibroblasts of comparable size distributions (mean diameter ∼10 μm). A DEP sorting efficiency greater than 98% was achieved for these two cell types, a result concluded to arise from the fibroblasts possessing a larger membrane capacitance than the myoblasts. It is currently assumed that differences in membrane capacitance primarily reflect differences in the extent of folding or surface features of the membrane. However, our finding by Raman spectroscopy that the fibroblast membranes contained a smaller proportion of saturated lipids than those of the myoblasts suggests that the membrane chemistry should also be taken into account. 相似文献
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在回应结构实在论对建构经验主义的挑战中,范弗拉森提出了结构经验主义的思想。按照范弗拉森,任一对象的内部元素都可以被赋予无数种合理的组合结构,结构实在论者要把那些本质的结构纳入研究视野,但却没有给出这种本质与非本质区分的合理根据。结构经验主义强调,具体语境决定了经验上恰当的组合结构。尽管结构经验主义理论还有许多困难,但还是丰富和完善了范弗拉森早期的建构经验主义。 相似文献
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In this paper, an algorithm is developed to apply Hann, Hamming, Blackman and related windows directly in the transform domain for the discrete cosine transform and discrete sine transform. These algorithms are useful in applications where windowing is required in order to minimize edge effects caused by implicit symmetries in the transform domain that are not replicated in the real-world data. Examples of such applications include data communication, adaptive system identification and filtering, real-time analysis of financial market data, etc. Software implementations in C language are also given. 相似文献
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提出了将科学期刊的累积引文分布函数看作是一个线性系统的脉冲响应,从而可以找到与其相联系的线性系统。可以看到,文中所找到的线性系统模型要比国外文献中的更为清晰。于是,可以应用时域分析法来研究引文分布函数。文中分析了几个著名分布的时域的重要特性,引入了上升时间的概念,用来表征引文分布的变化之快慢。对于几个著名的引文分布,推导了它们的上升时间和半衰期的计算公式。 相似文献
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G. Kusumanjali Chinnapu G. Reddy A. S. Kanagasabapathy Pragna Rao 《Indian journal of clinical biochemistry : IJCB》2005,20(2):146-149
Accurate monitoring of blood cyclosporin C2 levels is vital to prevent over immunosuppression and acute renal toxicity in
patients who receive organ transplant. The matrix used to dilute patients’ C2 samples prior to the assay affected the final
measured values. Hence there was a need to develop a method of dilution that would accurately estimate C2 levels when cyclosporin
levels were beyond the calibration range of the method employed. Whole blood, cyclosporin free hemolysate and cell and protein
free supernatant obtained after pretreatment of normal blood were used to dilute patients’ C2 samples. C2 was measured in
188 patients using the supernatant method of dilution. C2 was correlated with Co and dose of cyclosporin received by the patient.
The use of cell and protein free supernatant obtained after pretreatment of normal blood as a C2 diluent detected higher levels
of C2 in the sample. Measured C2 correlated significantly with Co and the cyclosporin dose received by the patient. The uniformly
aqueous cell and protein free supernatant ensures uniform dilution of the patients’ C2 sample and measures higher cyclosporin
levels. 相似文献